MK004927 K2371

Resource Type: 
Genetic Marker
Name: 
MK004927 K2371
Identifier: 
MK004927_K2371
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004927 K2371, is adjacent to primer, K2371_X.
The genetic_marker, MK004927 K2371, is adjacent to primer, K2371_Y.
The genetic_marker, MK004927 K2371, is adjacent to primer, K2371_Common.
The genetic_marker, MK004927 K2371, is located in gene, DCAR_017393.
The genetic_marker, MK004927 K2371, is located in gene, LOC108221896.
The marker_locus, K2371, is an instance of genetic_marker, MK004927 K2371.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr526.65K2371MapViewer
2016 70796 NG bin mapChr531.772K2371MapViewer
2016 Integ NG full mapCH537.877K2371MapViewer
2016 Integ NG bin mapCH536.983K2371MapViewer
2016 70796 NG full mapChr531.772K2371MapViewer
Synonyms: 
  • MK004927
Sequence Coordinates: 
DCARv2_Chr5:17119054..17119110+
View location in JBrowse: 
DCARv2_Chr5:17119054..17119110+
Sequence: 
TAGTTTTCAGTGATGAAGTTTATGACAAGTTAGCATTYGAAATGGATCAC
ATTTCAATAGCTTCTCTCCCA
Sequences: 
>MK004927_K2371 ID=MK004927_K2371; Name=MK004927 K2371; organism=Daucus carota; type=genetic_marker
TAGTTTTCAGTGATGAAGTTTATGACAAGTTAGCATTYGAAATGGATCAC
ATTTCAATAGCTTCTCTCCCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TAGTTTTCAGTGATGAAGTTTATGACAAGTTAGCATT
Three Prime Flanking Region: 
GAAATGGATCACATTTCAATAGCTTCTCTCCCA
SNP: 
C/T