MK004933 K2377

Resource Type: 
Genetic Marker
Name: 
MK004933 K2377
Identifier: 
MK004933_K2377
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004933 K2377, is adjacent to primer, K2377_X.
The genetic_marker, MK004933 K2377, is adjacent to primer, K2377_Y.
The genetic_marker, MK004933 K2377, is adjacent to primer, K2377_Common.
The genetic_marker, MK004933 K2377, is adjacent to gene, DCAR_016098.
The genetic_marker, MK004933 K2377, is located in gene, LOC108223969.
The marker_locus, K2377, is an instance of genetic_marker, MK004933 K2377.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH53.404K2377MapViewer
2016 70796 NG full mapChr571.483K2377MapViewer
Synonyms: 
  • MK004933
Sequence Coordinates: 
DCARv2_Chr5:299548..299596-
View location in JBrowse: 
DCARv2_Chr5:299548..299596-
Sequence: 
GTAAAGTATTTGAATCATCTTCGCCTAAACATTAACCWAAGAGAAACTGG
ACACCATCAAGCAGATATGCC
Sequences: 
>MK004933_K2377 ID=MK004933_K2377; Name=MK004933 K2377; organism=Daucus carota; type=genetic_marker
GTAAAGTATTTGAATCATCTTCGCCTAAACATTAACCWAAGAGAAACTGG
ACACCATCAAGCAGATATGCC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTAAAGTATTTGAATCATCTTCGCCTAAACATTAACC
Three Prime Flanking Region: 
AAGAGAAACTGGACACCATCAAGCAGATATGCC
SNP: 
A/T