MK004934 K2378

Resource Type: 
Genetic Marker
Name: 
MK004934 K2378
Identifier: 
MK004934_K2378
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK004934 K2378, is adjacent to primer, K2378_X.
The genetic_marker, MK004934 K2378, is adjacent to primer, K2378_Y.
The genetic_marker, MK004934 K2378, is adjacent to primer, K2378_Common.
The genetic_marker, MK004934 K2378, is located in gene, LOC108227362.
The marker_locus, K2378, is an instance of genetic_marker, MK004934 K2378.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH652.653K2378MapViewer
2016 70796 NG full mapChr646.998K2378MapViewer
Synonyms: 
  • MK004934
Sequence Coordinates: 
DCARv2_Chr6:13917256..13917327-
View location in JBrowse: 
DCARv2_Chr6:13917256..13917327-
Sequence: 
TATTGTTTTTGTACACAACTGAGTTAGAAAGCAACCAWAACGATTTAATT
CGATGACAAACAAAAATGAAG
Sequences: 
>MK004934_K2378 ID=MK004934_K2378; Name=MK004934 K2378; organism=Daucus carota; type=genetic_marker
TATTGTTTTTGTACACAACTGAGTTAGAAAGCAACCAWAACGATTTAATT
CGATGACAAACAAAAATGAAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TATTGTTTTTGTACACAACTGAGTTAGAAAGCAACCA
Three Prime Flanking Region: 
AACGATTTAATTCGATGACAAACAAAAATGAAG
SNP: 
A/T