MK004984 K2428

Resource Type: 
Genetic Marker
Name: 
MK004984 K2428
Identifier: 
MK004984_K2428
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK004984 K2428, is adjacent to primer, K2428_X.
The genetic_marker, MK004984 K2428, is adjacent to primer, K2428_Y.
The genetic_marker, MK004984 K2428, is adjacent to primer, K2428_Common.
The genetic_marker, MK004984 K2428, is located in gene, DCAR_019406.
The genetic_marker, MK004984 K2428, is located in gene, LOC108222899.
The marker_locus, K2428, is an instance of genetic_marker, MK004984 K2428.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr56.269K2428MapViewer
2016 Integ NG full mapCH561.064K2428MapViewer
Synonyms: 
  • MK004984
Sequence Coordinates: 
DCARv2_Chr5:38805151..38805197+
View location in JBrowse: 
DCARv2_Chr5:38805151..38805197+
Sequence: 
TCAAGGAGGCCATTTCCCTTGCACTGGAGAAAATCCCRCCATGTGTAGAA
CCTGTTGCCAAGCTCCTAGAG
Sequences: 
>MK004984_K2428 ID=MK004984_K2428; Name=MK004984 K2428; organism=Daucus carota; type=genetic_marker
TCAAGGAGGCCATTTCCCTTGCACTGGAGAAAATCCCRCCATGTGTAGAA
CCTGTTGCCAAGCTCCTAGAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCAAGGAGGCCATTTCCCTTGCACTGGAGAAAATCCC
Three Prime Flanking Region: 
CCATGTGTAGAACCTGTTGCCAAGCTCCTAGAG
SNP: 
A/G