MK004996 K2440

Resource Type: 
Genetic Marker
Name: 
MK004996 K2440
Identifier: 
MK004996_K2440
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK004996 K2440, is adjacent to primer, K2440_X.
The genetic_marker, MK004996 K2440, is adjacent to primer, K2440_Y.
The genetic_marker, MK004996 K2440, is adjacent to primer, K2440_Common.
The genetic_marker, MK004996 K2440, is located in gene, LOC108202812.
The marker_locus, K2440, is an instance of genetic_marker, MK004996 K2440.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr942.888K2440MapViewer
2016 Integ NG full mapCH938.424K2440MapViewer
2016 70796 NG full mapChr942.888K2440MapViewer
Synonyms: 
  • MK004996
Sequence Coordinates: 
DCARv2_Chr9:25360260..25360313+
View location in JBrowse: 
DCARv2_Chr9:25360260..25360313+
Sequence: 
AAAAAAATTCCCCATATAAACCAGCATAGATGAAACARGAAACCAACATC
TAATTGCTCTGTAGCAATGTA
Sequences: 
>MK004996_K2440 ID=MK004996_K2440; Name=MK004996 K2440; organism=Daucus carota; type=genetic_marker
AAAAAAATTCCCCATATAAACCAGCATAGATGAAACARGAAACCAACATC
TAATTGCTCTGTAGCAATGTA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAAAAAATTCCCCATATAAACCAGCATAGATGAAACA
Three Prime Flanking Region: 
GAAACCAACATCTAATTGCTCTGTAGCAATGTA
SNP: 
A/G