MK005007 K2451

Resource Type: 
Genetic Marker
Name: 
MK005007 K2451
Identifier: 
MK005007_K2451
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005007 K2451, is adjacent to primer, K2451_X.
The genetic_marker, MK005007 K2451, is adjacent to primer, K2451_Y.
The genetic_marker, MK005007 K2451, is adjacent to primer, K2451_Common.
The genetic_marker, MK005007 K2451, is located in gene, DCAR_017774.
The genetic_marker, MK005007 K2451, is located in gene, LOC108219709.
The marker_locus, K2451, is an instance of genetic_marker, MK005007 K2451.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr523.966K2451MapViewer
2016 Integ NG full mapCH544.544K2451MapViewer
Synonyms: 
  • MK005007
Sequence Coordinates: 
DCARv2_Chr5:23292919..23292969+
View location in JBrowse: 
DCARv2_Chr5:23292919..23292969+
Sequence: 
AAATTAAGTTGACTGCAGAAGAGATGGAGATGTATATYGACTTGCATCCG
TACACCAATGCTTCMCCTTAT
Sequences: 
>MK005007_K2451 ID=MK005007_K2451; Name=MK005007 K2451; organism=Daucus carota; type=genetic_marker
AAATTAAGTTGACTGCAGAAGAGATGGAGATGTATATYGACTTGCATCCG
TACACCAATGCTTCMCCTTAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAATTAAGTTGACTGCAGAAGAGATGGAGATGTATAT
Three Prime Flanking Region: 
GACTTGCATCCGTACACCAATGCTTCMCCTTAT
SNP: 
C/T