MK005061 K2505

Resource Type: 
Genetic Marker
Name: 
MK005061 K2505
Identifier: 
MK005061_K2505
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005061 K2505, is adjacent to primer, K2505_X.
The genetic_marker, MK005061 K2505, is adjacent to primer, K2505_Y.
The genetic_marker, MK005061 K2505, is adjacent to primer, K2505_Common.
The genetic_marker, MK005061 K2505, is adjacent to gene, DCAR_021728.
The genetic_marker, MK005061 K2505, is located in gene, LOC108227948.
The marker_locus, K2505, is an instance of genetic_marker, MK005061 K2505.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr650.414K2505MapViewer
2016 70796 NG full mapChr650.414K2505MapViewer
2016 Integ NG full mapCH656.064K2505MapViewer
Synonyms: 
  • MK005061
Sequence Coordinates: 
DCARv2_Chr6:20328534..20328588+
View location in JBrowse: 
DCARv2_Chr6:20328534..20328588+
Sequence: 
AGTGACAAAATACTTATTTAGATTAAAAGCACTGATTRAAGCAGAAGAAG
TAACCAGCTCTAGGCTCRTTT
Sequences: 
>MK005061_K2505 ID=MK005061_K2505; Name=MK005061 K2505; organism=Daucus carota; type=genetic_marker
AGTGACAAAATACTTATTTAGATTAAAAGCACTGATTRAAGCAGAAGAAG
TAACCAGCTCTAGGCTCRTTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGTGACAAAATACTTATTTAGATTAAAAGCACTGATT
Three Prime Flanking Region: 
AAGCAGAAGAAGTAACCAGCTCTAGGCTCRTTT
SNP: 
A/G