MK005096 K2540

Resource Type: 
Genetic Marker
Name: 
MK005096 K2540
Identifier: 
MK005096_K2540
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK005096 K2540, is adjacent to primer, K2540_X.
The genetic_marker, MK005096 K2540, is adjacent to primer, K2540_Y.
The genetic_marker, MK005096 K2540, is adjacent to primer, K2540_Common.
The genetic_marker, MK005096 K2540, is located in gene, LOC108200427.
The marker_locus, K2540, is an instance of genetic_marker, MK005096 K2540.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr947.291K2540MapViewer
2016 Integ NG full mapCH942.481K2540MapViewer
Synonyms: 
  • MK005096
Sequence Coordinates: 
DCARv2_Chr9:29065949..29066000-
View location in JBrowse: 
DCARv2_Chr9:29065949..29066000-
Sequence: 
CAGCCTACATACAACAATTCCGCCTTTTGCATTGAATRATTGACTACTAG
CTTTATAGCATTYGATCTAAA
Sequences: 
>MK005096_K2540 ID=MK005096_K2540; Name=MK005096 K2540; organism=Daucus carota; type=genetic_marker
CAGCCTACATACAACAATTCCGCCTTTTGCATTGAATRATTGACTACTAG
CTTTATAGCATTYGATCTAAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CAGCCTACATACAACAATTCCGCCTTTTGCATTGAAT
Three Prime Flanking Region: 
ATTGACTACTAGCTTTATAGCATTYGATCTAAA
SNP: 
A/G