MK005101 K2545

Resource Type: 
Genetic Marker
Name: 
MK005101 K2545
Identifier: 
MK005101_K2545
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005101 K2545, is adjacent to primer, K2545_X.
The genetic_marker, MK005101 K2545, is adjacent to primer, K2545_Y.
The genetic_marker, MK005101 K2545, is adjacent to primer, K2545_Common.
The genetic_marker, MK005101 K2545, is located in gene, DCAR_001936.
The genetic_marker, MK005101 K2545, is located in gene, LOC108205465.
The marker_locus, K2545, is an instance of genetic_marker, MK005101 K2545.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH143.387K2545MapViewer
2016 80592 NG full mapChr132.297K2545MapViewer
Synonyms: 
  • MK005101
Sequence Coordinates: 
DCARv2_Chr1:22520944..22520998+
View location in JBrowse: 
DCARv2_Chr1:22520944..22520998+
Sequence: 
GGATTGCGGCTACGGTTGTTTATAATGAGTATATTGCWGATAGGCACCAT
GTTCATATGAATTCTACTCAG
Sequences: 
>MK005101_K2545 ID=MK005101_K2545; Name=MK005101 K2545; organism=Daucus carota; type=genetic_marker
GGATTGCGGCTACGGTTGTTTATAATGAGTATATTGCWGATAGGCACCAT
GTTCATATGAATTCTACTCAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGATTGCGGCTACGGTTGTTTATAATGAGTATATTGC
Three Prime Flanking Region: 
GATAGGCACCATGTTCATATGAATTCTACTCAG
SNP: 
A/T