MK005134 K2578

Resource Type: 
Genetic Marker
Name: 
MK005134 K2578
Identifier: 
MK005134_K2578
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005134 K2578, is adjacent to primer, K2578_X.
The genetic_marker, MK005134 K2578, is adjacent to primer, K2578_Y.
The genetic_marker, MK005134 K2578, is adjacent to primer, K2578_Common.
The genetic_marker, MK005134 K2578, is located in gene, DCAR_026748.
The genetic_marker, MK005134 K2578, is located in gene, LOC108197395.
The marker_locus, K2578, is an instance of genetic_marker, MK005134 K2578.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr87.765K2578MapViewer
2016 Integ NG full mapCH858.515K2578MapViewer
Synonyms: 
  • MK005134
Sequence Coordinates: 
DCARv2_Chr8:29146587..29146654+
View location in JBrowse: 
DCARv2_Chr8:29146587..29146654+
Sequence: 
CCTTCGCAAAGGTGTGTTTGCTGCTGGGGCTGCACTGWCATTGCTATCCA
TGTTTGGATCTATTCTGTACT
Sequences: 
>MK005134_K2578 ID=MK005134_K2578; Name=MK005134 K2578; organism=Daucus carota; type=genetic_marker
CCTTCGCAAAGGTGTGTTTGCTGCTGGGGCTGCACTGWCATTGCTATCCA
TGTTTGGATCTATTCTGTACT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCTTCGCAAAGGTGTGTTTGCTGCTGGGGCTGCACTG
Three Prime Flanking Region: 
CATTGCTATCCATGTTTGGATCTATTCTGTACT
SNP: 
A/T