MK005135 K2579

Resource Type: 
Genetic Marker
Name: 
MK005135 K2579
Identifier: 
MK005135_K2579
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005135 K2579, is adjacent to primer, K2579_X.
The genetic_marker, MK005135 K2579, is adjacent to primer, K2579_Y.
The genetic_marker, MK005135 K2579, is adjacent to primer, K2579_Common.
The genetic_marker, MK005135 K2579, is located in gene, DCAR_022076.
The genetic_marker, MK005135 K2579, is located in gene, LOC108225806.
The marker_locus, K2579, is an instance of genetic_marker, MK005135 K2579.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH654.169K2579MapViewer
2016 70796 NG full mapChr648.502K2579MapViewer
Synonyms: 
  • MK005135
Sequence Coordinates: 
DCARv2_Chr6:16865788..16865837+
View location in JBrowse: 
DCARv2_Chr6:16865788..16865837+
Sequence: 
AAAGAGAGCAGCTAGGGCAGCGAGCGATCTCTTCGCCRAGTTTAAGATCC
TCTTTTGTGATTTGAAACAAA
Sequences: 
>MK005135_K2579 ID=MK005135_K2579; Name=MK005135 K2579; organism=Daucus carota; type=genetic_marker
AAAGAGAGCAGCTAGGGCAGCGAGCGATCTCTTCGCCRAGTTTAAGATCC
TCTTTTGTGATTTGAAACAAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAAGAGAGCAGCTAGGGCAGCGAGCGATCTCTTCGCC
Three Prime Flanking Region: 
AGTTTAAGATCCTCTTTTGTGATTTGAAACAAA
SNP: 
A/G