MK005159 K2603

Resource Type: 
Genetic Marker
Name: 
MK005159 K2603
Identifier: 
MK005159_K2603
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK005159 K2603, is adjacent to primer, K2603_X.
The genetic_marker, MK005159 K2603, is adjacent to primer, K2603_Y.
The genetic_marker, MK005159 K2603, is adjacent to primer, K2603_Common.
The genetic_marker, MK005159 K2603, is located in gene, LOC108220632.
The marker_locus, K2603, is an instance of genetic_marker, MK005159 K2603.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH518.931K2603MapViewer
2016 70796 NG full mapChr555.872K2603MapViewer
Synonyms: 
  • MK005159
Sequence Coordinates: 
DCARv2_Chr5:7580580..7580625+
View location in JBrowse: 
DCARv2_Chr5:7580580..7580625+
Sequence: 
AGCAAGATTTGTAGCTAAAACACCATCCTGTGCACATRCTAGCCTACTCA
ACGGACTAAGATRTAAAGATA
Sequences: 
>MK005159_K2603 ID=MK005159_K2603; Name=MK005159 K2603; organism=Daucus carota; type=genetic_marker
AGCAAGATTTGTAGCTAAAACACCATCCTGTGCACATRCTAGCCTACTCA
ACGGACTAAGATRTAAAGATA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGCAAGATTTGTAGCTAAAACACCATCCTGTGCACAT
Three Prime Flanking Region: 
CTAGCCTACTCAACGGACTAAGATRTAAAGATA
SNP: 
A/G