MK005184 K2628

Resource Type: 
Genetic Marker
Name: 
MK005184 K2628
Identifier: 
MK005184_K2628
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005184 K2628, is adjacent to primer, K2628_X.
The genetic_marker, MK005184 K2628, is adjacent to primer, K2628_Y.
The genetic_marker, MK005184 K2628, is adjacent to primer, K2628_Common.
The genetic_marker, MK005184 K2628, is located in gene, DCAR_017343.
The genetic_marker, MK005184 K2628, is located in gene, LOC108223816.
The marker_locus, K2628, is an instance of genetic_marker, MK005184 K2628.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH531.881K2628MapViewer
2016 70796 NG full mapChr539.504K2628MapViewer
Synonyms: 
  • MK005184
Sequence Coordinates: 
DCARv2_Chr5:15495066..15495113-
View location in JBrowse: 
DCARv2_Chr5:15495066..15495113-
Sequence: 
AGKTTAGCTACGACAAAGGCACTGTCTGCAATGTGGTSCAAATCTCCTGA
ATTCGTCCATAGGAGATTGGC
Sequences: 
>MK005184_K2628 ID=MK005184_K2628; Name=MK005184 K2628; organism=Daucus carota; type=genetic_marker
AGKTTAGCTACGACAAAGGCACTGTCTGCAATGTGGTSCAAATCTCCTGA
ATTCGTCCATAGGAGATTGGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGKTTAGCTACGACAAAGGCACTGTCTGCAATGTGGT
Three Prime Flanking Region: 
CAAATCTCCTGAATTCGTCCATAGGAGATTGGC
SNP: 
C/G