MK005280 K2724

Resource Type: 
Genetic Marker
Name: 
MK005280 K2724
Identifier: 
MK005280_K2724
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005280 K2724, is adjacent to primer, K2724_X.
The genetic_marker, MK005280 K2724, is adjacent to primer, K2724_Y.
The genetic_marker, MK005280 K2724, is adjacent to primer, K2724_Common.
The genetic_marker, MK005280 K2724, is located in gene, DCAR_029257.
The genetic_marker, MK005280 K2724, is located in gene, LOC108200238.
The marker_locus, K2724, is an instance of genetic_marker, MK005280 K2724.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH97.251K2724MapViewer
2016 70796 NG full mapChr98.548K2724MapViewer
Synonyms: 
  • MK005280
Sequence Coordinates: 
DCARv2_Chr9:3939556..3939603-
View location in JBrowse: 
DCARv2_Chr9:3939556..3939603-
Sequence: 
CCAAGGGCCAAGTGGCTCTACTAATGCTAGTCGTCAARGATTGAGAAGCC
TACGCACTTCCATATCAGMCG
Sequences: 
>MK005280_K2724 ID=MK005280_K2724; Name=MK005280 K2724; organism=Daucus carota; type=genetic_marker
CCAAGGGCCAAGTGGCTCTACTAATGCTAGTCGTCAARGATTGAGAAGCC
TACGCACTTCCATATCAGMCG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCAAGGGCCAAGTGGCTCTACTAATGCTAGTCGTCAA
Three Prime Flanking Region: 
GATTGAGAAGCCTACGCACTTCCATATCAGMCG
SNP: 
A/G