MK005300 K2744

Resource Type: 
Genetic Marker
Name: 
MK005300 K2744
Identifier: 
MK005300_K2744
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005300 K2744, is adjacent to primer, K2744_X.
The genetic_marker, MK005300 K2744, is adjacent to primer, K2744_Y.
The genetic_marker, MK005300 K2744, is adjacent to primer, K2744_Common.
The genetic_marker, MK005300 K2744, is located in gene, DCAR_021320.
The genetic_marker, MK005300 K2744, is located in gene, LOC108227821.
The marker_locus, K2744, is an instance of genetic_marker, MK005300 K2744.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH657.545K2744MapViewer
2016 70796 NG full mapChr651.89K2744MapViewer
Synonyms: 
  • MK005300
Sequence Coordinates: 
DCARv2_Chr6:24073058..24073114+
View location in JBrowse: 
DCARv2_Chr6:24073058..24073114+
Sequence: 
GARGATGATGATATTGCTTCTGAAGAAGAGATTGAAAYAAGTGATGCCAA
TAAGCAGACAGTTCGGCACCA
Sequences: 
>MK005300_K2744 ID=MK005300_K2744; Name=MK005300 K2744; organism=Daucus carota; type=genetic_marker
GARGATGATGATATTGCTTCTGAAGAAGAGATTGAAAYAAGTGATGCCAA
TAAGCAGACAGTTCGGCACCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GARGATGATGATATTGCTTCTGAAGAAGAGATTGAAA
Three Prime Flanking Region: 
AAGTGATGCCAATAAGCAGACAGTTCGGCACCA
SNP: 
C/T