MK005303 K2747

Resource Type: 
Genetic Marker
Name: 
MK005303 K2747
Identifier: 
MK005303_K2747
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005303 K2747, is adjacent to primer, K2747_X.
The genetic_marker, MK005303 K2747, is adjacent to primer, K2747_Y.
The genetic_marker, MK005303 K2747, is adjacent to primer, K2747_Common.
The genetic_marker, MK005303 K2747, is located in gene, DCAR_001244.
The genetic_marker, MK005303 K2747, is located in gene, LOC108205745.
The marker_locus, K2747, is an instance of genetic_marker, MK005303 K2747.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr163.833K2747MapViewer
2016 80592 NG bin mapChr163.833K2747MapViewer
2016 Integ NG bin mapCH113.343K2747MapViewer
2016 Integ NG full mapCH112.427K2747MapViewer
Synonyms: 
  • MK005303
Sequence Coordinates: 
DCARv2_Chr1:3588351..3588413-
View location in JBrowse: 
DCARv2_Chr1:3588351..3588413-
Sequence: 
CATCTCCAGGAACACGTTTTAACATTTCAAAACTCTTYCGACTCCCCAGG
AAATCAATGCGCTTAAACTCC
Sequences: 
>MK005303_K2747 ID=MK005303_K2747; Name=MK005303 K2747; organism=Daucus carota; type=genetic_marker
CATCTCCAGGAACACGTTTTAACATTTCAAAACTCTTYCGACTCCCCAGG
AAATCAATGCGCTTAAACTCC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CATCTCCAGGAACACGTTTTAACATTTCAAAACTCTT
Three Prime Flanking Region: 
CGACTCCCCAGGAAATCAATGCGCTTAAACTCC
SNP: 
C/T