MK005383 K2827

Resource Type: 
Genetic Marker
Name: 
MK005383 K2827
Identifier: 
MK005383_K2827
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005383 K2827, is adjacent to primer, K2827_X.
The genetic_marker, MK005383 K2827, is adjacent to primer, K2827_Y.
The genetic_marker, MK005383 K2827, is adjacent to primer, K2827_Common.
The genetic_marker, MK005383 K2827, is located in gene, DCAR_029103.
The genetic_marker, MK005383 K2827, is located in gene, LOC108200181.
The marker_locus, K2827, is an instance of genetic_marker, MK005383 K2827.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH93.588K2827MapViewer
2016 70796 NG full mapChr94.89K2827MapViewer
Synonyms: 
  • MK005383
Sequence Coordinates: 
DCARv2_Chr9:1779740..1779780+
View location in JBrowse: 
DCARv2_Chr9:1779740..1779780+
Sequence: 
ATAGTGTCACAACAGAACGGCCTGAATGAGCAATCATKATCCCTTCCACA
GGCCGGTAATCCTCCATATAA
Sequences: 
>MK005383_K2827 ID=MK005383_K2827; Name=MK005383 K2827; organism=Daucus carota; type=genetic_marker
ATAGTGTCACAACAGAACGGCCTGAATGAGCAATCATKATCCCTTCCACA
GGCCGGTAATCCTCCATATAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ATAGTGTCACAACAGAACGGCCTGAATGAGCAATCAT
Three Prime Flanking Region: 
ATCCCTTCCACAGGCCGGTAATCCTCCATATAA
SNP: 
G/T