MK005389 K2833

Resource Type: 
Genetic Marker
Name: 
MK005389 K2833
Identifier: 
MK005389_K2833
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005389 K2833, is adjacent to primer, K2833_X.
The genetic_marker, MK005389 K2833, is adjacent to primer, K2833_Y.
The genetic_marker, MK005389 K2833, is adjacent to primer, K2833_Common.
The genetic_marker, MK005389 K2833, is located in gene, DCAR_030647.
The genetic_marker, MK005389 K2833, is located in gene, LOC108200361.
The marker_locus, K2833, is an instance of genetic_marker, MK005389 K2833.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr947.291K2833MapViewer
2016 Integ NG full mapCH942.486K2833MapViewer
Synonyms: 
  • MK005389
Sequence Coordinates: 
DCARv2_Chr9:28555754..28555807+
View location in JBrowse: 
DCARv2_Chr9:28555754..28555807+
Sequence: 
GTATARTCCTCAGAAAGTTCCATTTCATCAGCAGAGAKACATCCAGAGAA
AACTCGTGGTGAATTAGATTT
Sequences: 
>MK005389_K2833 ID=MK005389_K2833; Name=MK005389 K2833; organism=Daucus carota; type=genetic_marker
GTATARTCCTCAGAAAGTTCCATTTCATCAGCAGAGAKACATCCAGAGAA
AACTCGTGGTGAATTAGATTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTATARTCCTCAGAAAGTTCCATTTCATCAGCAGAGA
Three Prime Flanking Region: 
ACATCCAGAGAAAACTCGTGGTGAATTAGATTT
SNP: 
G/T