MK005428 K2872

Resource Type: 
Genetic Marker
Name: 
MK005428 K2872
Identifier: 
MK005428_K2872
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005428 K2872, is adjacent to primer, K2872_X.
The genetic_marker, MK005428 K2872, is adjacent to primer, K2872_Y.
The genetic_marker, MK005428 K2872, is adjacent to primer, K2872_Common.
The genetic_marker, MK005428 K2872, is located in gene, DCAR_021017.
The genetic_marker, MK005428 K2872, is located in gene, LOC108226398.
The marker_locus, K2872, is an instance of genetic_marker, MK005428 K2872.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr652.997K2872MapViewer
2016 80592 NG full mapChr68.018K2872MapViewer
2016 Integ NG full mapCH658.393K2872MapViewer
Synonyms: 
  • MK005428
Sequence Coordinates: 
DCARv2_Chr6:26580436..26580498-
View location in JBrowse: 
DCARv2_Chr6:26580436..26580498-
Sequence: 
GGCCTGGTTTTGATATTTCCATCTCACTCACATCAATRTCACCTTTTAAC
ATGTTTACTACGTCTGACATT
Sequences: 
>MK005428_K2872 ID=MK005428_K2872; Name=MK005428 K2872; organism=Daucus carota; type=genetic_marker
GGCCTGGTTTTGATATTTCCATCTCACTCACATCAATRTCACCTTTTAAC
ATGTTTACTACGTCTGACATT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGCCTGGTTTTGATATTTCCATCTCACTCACATCAAT
Three Prime Flanking Region: 
TCACCTTTTAACATGTTTACTACGTCTGACATT
SNP: 
A/G