MK005443 K2887

Resource Type: 
Genetic Marker
Name: 
MK005443 K2887
Identifier: 
MK005443_K2887
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005443 K2887, is adjacent to primer, K2887_X.
The genetic_marker, MK005443 K2887, is adjacent to primer, K2887_Y.
The genetic_marker, MK005443 K2887, is adjacent to primer, K2887_Common.
The genetic_marker, MK005443 K2887, is located in gene, DCAR_030764.
The genetic_marker, MK005443 K2887, is located in gene, LOC108200676.
The marker_locus, K2887, is an instance of genetic_marker, MK005443 K2887.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH946.364K2887MapViewer
2016 70796 NG bin mapChr948.913K2887MapViewer
2016 Integ NG full mapCH944.021K2887MapViewer
2016 70796 NG full mapChr948.913K2887MapViewer
Synonyms: 
  • MK005443
Sequence Coordinates: 
DCARv2_Chr9:29523502..29523549+
View location in JBrowse: 
DCARv2_Chr9:29523502..29523549+
Sequence: 
CTACTTCTATCCCTGGATCTGGAACTGCATTGCGATGSACATGAGGGGGC
TGTAATCCATCTCCTCCAGGC
Sequences: 
>MK005443_K2887 ID=MK005443_K2887; Name=MK005443 K2887; organism=Daucus carota; type=genetic_marker
CTACTTCTATCCCTGGATCTGGAACTGCATTGCGATGSACATGAGGGGGC
TGTAATCCATCTCCTCCAGGC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTACTTCTATCCCTGGATCTGGAACTGCATTGCGATG
Three Prime Flanking Region: 
ACATGAGGGGGCTGTAATCCATCTCCTCCAGGC
SNP: 
C/G