MK005444 K2888

Resource Type: 
Genetic Marker
Name: 
MK005444 K2888
Identifier: 
MK005444_K2888
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005444 K2888, is adjacent to primer, K2888_X.
The genetic_marker, MK005444 K2888, is adjacent to primer, K2888_Y.
The genetic_marker, MK005444 K2888, is adjacent to primer, K2888_Common.
The genetic_marker, MK005444 K2888, is located in gene, DCAR_027001.
The genetic_marker, MK005444 K2888, is located in gene, LOC108197408.
The marker_locus, K2888, is an instance of genetic_marker, MK005444 K2888.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr810.9K2888MapViewer
2016 70796 NG full mapChr810.9K2888MapViewer
2016 Integ NG full mapCH855.54K2888MapViewer
2016 Integ NG bin mapCH849.915K2888MapViewer
Synonyms: 
  • MK005444
Sequence Coordinates: 
DCARv2_Chr8:26876591..26876638+
View location in JBrowse: 
Sequence: 
CAGCTCCTAACCAGCAACATATTCATGATCCATCCATRAAGACAGCACCA
TATTCACTCGCTTTCAGAAAY
Sequences: 
>MK005444_K2888 ID=MK005444_K2888; Name=MK005444 K2888; organism=Daucus carota; type=genetic_marker
CAGCTCCTAACCAGCAACATATTCATGATCCATCCATRAAGACAGCACCA
TATTCACTCGCTTTCAGAAAY
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CAGCTCCTAACCAGCAACATATTCATGATCCATCCAT
Three Prime Flanking Region: 
AAGACAGCACCATATTCACTCGCTTTCAGAAAY
SNP: 
A/G