MK005489 K2933

Resource Type: 
Genetic Marker
Name: 
MK005489 K2933
Identifier: 
MK005489_K2933
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005489 K2933, is adjacent to primer, K2933_X.
The genetic_marker, MK005489 K2933, is adjacent to primer, K2933_Y.
The genetic_marker, MK005489 K2933, is adjacent to primer, K2933_Common.
The genetic_marker, MK005489 K2933, is located in gene, DCAR_001976.
The genetic_marker, MK005489 K2933, is located in gene, LOC108205286.
The marker_locus, K2933, is an instance of genetic_marker, MK005489 K2933.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH142.851K2933MapViewer
2016 70796 NG full mapChr122.756K2933MapViewer
2016 Integ NG bin mapCH145.681K2933MapViewer
2016 80592 NG full mapChr132.297K2933MapViewer
Synonyms: 
  • MK005489
Sequence Coordinates: 
DCARv2_Chr1:23154575..23154629-
View location in JBrowse: 
DCARv2_Chr1:23154575..23154629-
Sequence: 
AACTCTGCCCAATCTGTCGTGAGGATCTAATCTGCCTSCCCCCAAAAGTT
TCGGCTAGTTTAGGACATCTT
Sequences: 
>MK005489_K2933 ID=MK005489_K2933; Name=MK005489 K2933; organism=Daucus carota; type=genetic_marker
AACTCTGCCCAATCTGTCGTGAGGATCTAATCTGCCTSCCCCCAAAAGTT
TCGGCTAGTTTAGGACATCTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AACTCTGCCCAATCTGTCGTGAGGATCTAATCTGCCT
Three Prime Flanking Region: 
CCCCCAAAAGTTTCGGCTAGTTTAGGACATCTT
SNP: 
C/G