MK005514 K2958

Resource Type: 
Genetic Marker
Name: 
MK005514 K2958
Identifier: 
MK005514_K2958
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005514 K2958, is adjacent to primer, K2958_X.
The genetic_marker, MK005514 K2958, is adjacent to primer, K2958_Y.
The genetic_marker, MK005514 K2958, is adjacent to primer, K2958_Common.
The genetic_marker, MK005514 K2958, is located in gene, DCAR_003139.
The genetic_marker, MK005514 K2958, is located in gene, LOC108204800.
The marker_locus, K2958, is an instance of genetic_marker, MK005514 K2958.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr125.446K2958MapViewer
2016 Integ NG full mapCH150.132K2958MapViewer
Synonyms: 
  • MK005514
Sequence Coordinates: 
DCARv2_Chr1:36160323..36160378+
View location in JBrowse: 
DCARv2_Chr1:36160323..36160378+
Sequence: 
GTTTAGGCAAGTCTCTAGAGATTGATGCTGCTACAAGRCGGTTAATTCCA
TCAAATAAACCCTTGGAATCT
Sequences: 
>MK005514_K2958 ID=MK005514_K2958; Name=MK005514 K2958; organism=Daucus carota; type=genetic_marker
GTTTAGGCAAGTCTCTAGAGATTGATGCTGCTACAAGRCGGTTAATTCCA
TCAAATAAACCCTTGGAATCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GTTTAGGCAAGTCTCTAGAGATTGATGCTGCTACAAG
Three Prime Flanking Region: 
CGGTTAATTCCATCAAATAAACCCTTGGAATCT
SNP: 
A/G