MK005845 K3289

Resource Type: 
Genetic Marker
Name: 
MK005845 K3289
Identifier: 
MK005845_K3289
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK005845 K3289, is adjacent to primer, K3289_X.
The genetic_marker, MK005845 K3289, is adjacent to primer, K3289_Y.
The genetic_marker, MK005845 K3289, is adjacent to primer, K3289_Common.
The genetic_marker, MK005845 K3289, is located in gene, DCAR_018430.
The genetic_marker, MK005845 K3289, is located in gene, LOC108219763.
The marker_locus, K3289, is an instance of genetic_marker, MK005845 K3289.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr517.915K3289MapViewer
2016 Integ NG full mapCH549.696K3289MapViewer
Synonyms: 
  • MK005845
Sequence Coordinates: 
DCARv2_Chr5:29742879..29742929-
View location in JBrowse: 
DCARv2_Chr5:29742879..29742929-
Sequence: 
CAAATCCCCACTCTTCCATTGTCTGTATGTTCACCAASTCTATCACCAAA
GTCTCCTGCTGACTTTGGGAT
Sequences: 
>MK005845_K3289 ID=MK005845_K3289; Name=MK005845 K3289; organism=Daucus carota; type=genetic_marker
CAAATCCCCACTCTTCCATTGTCTGTATGTTCACCAASTCTATCACCAAA
GTCTCCTGCTGACTTTGGGAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CAAATCCCCACTCTTCCATTGTCTGTATGTTCACCAA
Three Prime Flanking Region: 
TCTATCACCAAAGTCTCCTGCTGACTTTGGGAT
SNP: 
C/G