MK005916 K3360

Resource Type: 
Genetic Marker
Name: 
MK005916 K3360
Identifier: 
MK005916_K3360
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK005916 K3360, is adjacent to primer, K3360_X.
The genetic_marker, MK005916 K3360, is adjacent to primer, K3360_Y.
The genetic_marker, MK005916 K3360, is adjacent to primer, K3360_Common.
The genetic_marker, MK005916 K3360, is located in gene, DCAR_002272.
The marker_locus, K3360, is an instance of genetic_marker, MK005916 K3360.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr130.153K3360MapViewer
2016 Integ NG full mapCH145.696K3360MapViewer
Synonyms: 
  • MK005916
Sequence Coordinates: 
DCARv2_Chr1:27691519..27691578+
View location in JBrowse: 
DCARv2_Chr1:27691519..27691578+
Sequence: 
CCTCAGCCTGTCTGCAATTTCTTTCACTTCTGGCAAGYGTACATTTTTTG
CACTTGTCAATATCATTTGTC
Sequences: 
>MK005916_K3360 ID=MK005916_K3360; Name=MK005916 K3360; organism=Daucus carota; type=genetic_marker
CCTCAGCCTGTCTGCAATTTCTTTCACTTCTGGCAAGYGTACATTTTTTG
CACTTGTCAATATCATTTGTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCTCAGCCTGTCTGCAATTTCTTTCACTTCTGGCAAG
Three Prime Flanking Region: 
GTACATTTTTTGCACTTGTCAATATCATTTGTC
SNP: 
C/T