MK006054 K3498

Resource Type: 
Genetic Marker
Name: 
MK006054 K3498
Identifier: 
MK006054_K3498
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006054 K3498, is adjacent to primer, K3498_X.
The genetic_marker, MK006054 K3498, is adjacent to primer, K3498_Y.
The genetic_marker, MK006054 K3498, is adjacent to primer, K3498_Common.
The genetic_marker, MK006054 K3498, is located in gene, DCAR_022987.
The genetic_marker, MK006054 K3498, is located in gene, LOC108193031.
The marker_locus, K3498, is an instance of genetic_marker, MK006054 K3498.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr63.558K3498MapViewer
2016 Integ NG full mapCH616.158K3498MapViewer
2016 Integ NG bin mapCH615.131K3498MapViewer
2016 70796 NG full mapChr63.558K3498MapViewer
Synonyms: 
  • MK006054
Sequence Coordinates: 
DCARv2_Chr6:2878345..2878390+
View location in JBrowse: 
DCARv2_Chr6:2878345..2878390+
Sequence: 
CTGGTAAGTTTGAAGTTCAGAGGTTCTCTTTTCTCCCRAAGCCAGTTTTT
GAGAAACATCAGGAGTATTTG
Sequences: 
>MK006054_K3498 ID=MK006054_K3498; Name=MK006054 K3498; organism=Daucus carota; type=genetic_marker
CTGGTAAGTTTGAAGTTCAGAGGTTCTCTTTTCTCCCRAAGCCAGTTTTT
GAGAAACATCAGGAGTATTTG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTGGTAAGTTTGAAGTTCAGAGGTTCTCTTTTCTCCC
Three Prime Flanking Region: 
AAGCCAGTTTTTGAGAAACATCAGGAGTATTTG
SNP: 
A/G