MK006078 K3522

Resource Type: 
Genetic Marker
Name: 
MK006078 K3522
Identifier: 
MK006078_K3522
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006078 K3522, is adjacent to primer, K3522_X.
The genetic_marker, MK006078 K3522, is adjacent to primer, K3522_Y.
The genetic_marker, MK006078 K3522, is adjacent to primer, K3522_Common.
The genetic_marker, MK006078 K3522, is adjacent to gene, DCAR_027690.
The genetic_marker, MK006078 K3522, is adjacent to gene, LOC108197349.
The marker_locus, K3522, is an instance of genetic_marker, MK006078 K3522.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH848.342K3522MapViewer
2016 70796 NG full mapChr818.347K3522MapViewer
Synonyms: 
  • MK006078
Sequence Coordinates: 
DCARv2_Chr8:20581870..20584477+
View location in JBrowse: 
DCARv2_Chr8:20581870..20584477+
Sequence: 
GGGAGAGGGAATGCCACATTCCGGGGTACAACTTGAAKGTCTTGTCAGAG
CTGATCGCCTTTTCATGAAGA
Sequences: 
>MK006078_K3522 ID=MK006078_K3522; Name=MK006078 K3522; organism=Daucus carota; type=genetic_marker
GGGAGAGGGAATGCCACATTCCGGGGTACAACTTGAAKGTCTTGTCAGAG
CTGATCGCCTTTTCATGAAGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGGAGAGGGAATGCCACATTCCGGGGTACAACTTGAA
Three Prime Flanking Region: 
GTCTTGTCAGAGCTGATCGCCTTTTCATGAAGA
SNP: 
G/T