MK006086 K3530

Resource Type: 
Genetic Marker
Name: 
MK006086 K3530
Identifier: 
MK006086_K3530
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006086 K3530, is adjacent to primer, K3530_X.
The genetic_marker, MK006086 K3530, is adjacent to primer, K3530_Y.
The genetic_marker, MK006086 K3530, is adjacent to primer, K3530_Common.
The genetic_marker, MK006086 K3530, is located in gene, DCAR_001979.
The genetic_marker, MK006086 K3530, is located in gene, LOC108204406.
The marker_locus, K3530, is an instance of genetic_marker, MK006086 K3530.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr122.756K3530MapViewer
2016 80592 NG full mapChr132.297K3530MapViewer
2016 Integ NG full mapCH142.933K3530MapViewer
Synonyms: 
  • MK006086
Sequence Coordinates: 
DCARv2_Chr1:23226720..23226773+
View location in JBrowse: 
DCARv2_Chr1:23226720..23226773+
Sequence: 
RCTGACGATACGTCCCTGTCCTAATTTCATCAATGACRGTTGGTTCAAGA
TCTACAAATATAGCTCTAGGA
Sequences: 
>MK006086_K3530 ID=MK006086_K3530; Name=MK006086 K3530; organism=Daucus carota; type=genetic_marker
RCTGACGATACGTCCCTGTCCTAATTTCATCAATGACRGTTGGTTCAAGA
TCTACAAATATAGCTCTAGGA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
RCTGACGATACGTCCCTGTCCTAATTTCATCAATGAC
Three Prime Flanking Region: 
GTTGGTTCAAGATCTACAAATATAGCTCTAGGA
SNP: 
A/G