MK006089 K3533

Resource Type: 
Genetic Marker
Name: 
MK006089 K3533
Identifier: 
MK006089_K3533
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006089 K3533, is adjacent to primer, K3533_X.
The genetic_marker, MK006089 K3533, is adjacent to primer, K3533_Y.
The genetic_marker, MK006089 K3533, is adjacent to primer, K3533_Common.
The genetic_marker, MK006089 K3533, is located in gene, DCAR_031102.
The genetic_marker, MK006089 K3533, is located in gene, LOC108200710.
The marker_locus, K3533, is an instance of genetic_marker, MK006089 K3533.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH950.313K3533MapViewer
2016 80592 NG full mapChr951.656K3533MapViewer
2016 70796 NG full mapChr955.252K3533MapViewer
Synonyms: 
  • MK006089
Sequence Coordinates: 
DCARv2_Chr9:32744557..32744609+
View location in JBrowse: 
DCARv2_Chr9:32744557..32744609+
Sequence: 
CACTTTGTTCCACTTCTACCCAATTTATAACCTTGAGYAGAAGGGACTGA
GGAATTTTTCGAGCATCAGCT
Sequences: 
>MK006089_K3533 ID=MK006089_K3533; Name=MK006089 K3533; organism=Daucus carota; type=genetic_marker
CACTTTGTTCCACTTCTACCCAATTTATAACCTTGAGYAGAAGGGACTGA
GGAATTTTTCGAGCATCAGCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CACTTTGTTCCACTTCTACCCAATTTATAACCTTGAG
Three Prime Flanking Region: 
AGAAGGGACTGAGGAATTTTTCGAGCATCAGCT
SNP: 
C/T