MK006102 K3546

Resource Type: 
Genetic Marker
Name: 
MK006102 K3546
Identifier: 
MK006102_K3546
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006102 K3546, is adjacent to primer, K3546_X.
The genetic_marker, MK006102 K3546, is adjacent to primer, K3546_Y.
The genetic_marker, MK006102 K3546, is adjacent to primer, K3546_Common.
The genetic_marker, MK006102 K3546, is located in gene, DCAR_022614.
The genetic_marker, MK006102 K3546, is located in gene, LOC108192981.
The marker_locus, K3546, is an instance of genetic_marker, MK006102 K3546.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH650.574K3546MapViewer
2016 70796 NG full mapChr644.99K3546MapViewer
Synonyms: 
  • MK006102
Sequence Coordinates: 
DCARv2_Chr6:9651603..9651650-
View location in JBrowse: 
DCARv2_Chr6:9651603..9651650-
Sequence: 
TTTTGCAGGCAGTGCTTCACATTCAGGACCAATCATGRCAAATGCCGCAT
CTAGGTCTAGCTATTCTAYGT
Sequences: 
>MK006102_K3546 ID=MK006102_K3546; Name=MK006102 K3546; organism=Daucus carota; type=genetic_marker
TTTTGCAGGCAGTGCTTCACATTCAGGACCAATCATGRCAAATGCCGCAT
CTAGGTCTAGCTATTCTAYGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTTTGCAGGCAGTGCTTCACATTCAGGACCAATCATG
Three Prime Flanking Region: 
CAAATGCCGCATCTAGGTCTAGCTATTCTAYGT
SNP: 
A/G