MK006173 K3617

Resource Type: 
Genetic Marker
Name: 
MK006173 K3617
Identifier: 
MK006173_K3617
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006173 K3617, is adjacent to primer, K3617_X.
The genetic_marker, MK006173 K3617, is adjacent to primer, K3617_Y.
The genetic_marker, MK006173 K3617, is adjacent to primer, K3617_Common.
The genetic_marker, MK006173 K3617, is located in gene, DCAR_001620.
The genetic_marker, MK006173 K3617, is located in gene, LOC108204890.
The marker_locus, K3617, is an instance of genetic_marker, MK006173 K3617.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH139.093K3617MapViewer
2016 80592 NG full mapChr136.514K3617MapViewer
Synonyms: 
  • MK006173
Sequence Coordinates: 
DCARv2_Chr1:18226897..18226943+
View location in JBrowse: 
DCARv2_Chr1:18226897..18226943+
Sequence: 
CTGGGCAACCTTTAGCACGGGCGAAAGGCGTCAAGATKCTGGTTCTGATC
AATCTATATTTGTAGGTGATT
Sequences: 
>MK006173_K3617 ID=MK006173_K3617; Name=MK006173 K3617; organism=Daucus carota; type=genetic_marker
CTGGGCAACCTTTAGCACGGGCGAAAGGCGTCAAGATKCTGGTTCTGATC
AATCTATATTTGTAGGTGATT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CTGGGCAACCTTTAGCACGGGCGAAAGGCGTCAAGAT
Three Prime Flanking Region: 
CTGGTTCTGATCAATCTATATTTGTAGGTGATT
SNP: 
G/T