MK006176 K3620

Resource Type: 
Genetic Marker
Name: 
MK006176 K3620
Identifier: 
MK006176_K3620
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006176 K3620, is adjacent to primer, K3620_X.
The genetic_marker, MK006176 K3620, is adjacent to primer, K3620_Y.
The genetic_marker, MK006176 K3620, is adjacent to primer, K3620_Common.
The genetic_marker, MK006176 K3620, is located in gene, DCAR_018827.
The genetic_marker, MK006176 K3620, is located in gene, LOC108224062.
The marker_locus, K3620, is an instance of genetic_marker, MK006176 K3620.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr514.035K3620MapViewer
2016 Integ NG full mapCH553.525K3620MapViewer
Synonyms: 
  • MK006176
Sequence Coordinates: 
DCARv2_Chr5:33617525..33617573-
View location in JBrowse: 
DCARv2_Chr5:33617525..33617573-
Sequence: 
AACTAAGTCCAGTACAGTACCTCCTTCAAGTCCCCTCRTCCCGCTGCATC
AGCCAATGGTCAGTTCCAGTC
Sequences: 
>MK006176_K3620 ID=MK006176_K3620; Name=MK006176 K3620; organism=Daucus carota; type=genetic_marker
AACTAAGTCCAGTACAGTACCTCCTTCAAGTCCCCTCRTCCCGCTGCATC
AGCCAATGGTCAGTTCCAGTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AACTAAGTCCAGTACAGTACCTCCTTCAAGTCCCCTC
Three Prime Flanking Region: 
TCCCGCTGCATCAGCCAATGGTCAGTTCCAGTC
SNP: 
A/G