MK006256 K3700

Resource Type: 
Genetic Marker
Name: 
MK006256 K3700
Identifier: 
MK006256_K3700
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006256 K3700, is adjacent to primer, K3700_X.
The genetic_marker, MK006256 K3700, is adjacent to primer, K3700_Y.
The genetic_marker, MK006256 K3700, is adjacent to primer, K3700_Common.
The genetic_marker, MK006256 K3700, is located in gene, DCAR_029504.
The genetic_marker, MK006256 K3700, is located in gene, LOC108202669.
The marker_locus, K3700, is an instance of genetic_marker, MK006256 K3700.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH915.186K3700MapViewer
2016 70796 NG full mapChr914.952K3700MapViewer
2016 Integ NG full mapCH913.641K3700MapViewer
2016 70796 NG bin mapChr914.952K3700MapViewer
Synonyms: 
  • MK006256
Sequence Coordinates: 
DCARv2_Chr9:7943437..7943491-
View location in JBrowse: 
DCARv2_Chr9:7943437..7943491-
Sequence: 
AAGCATCCTTGTCCAAGCCACCAACAAAAATCTCAAAYTCTTTCCTTTTT
CGCCTCTCTTTGAAAACGTCA
Sequences: 
>MK006256_K3700 ID=MK006256_K3700; Name=MK006256 K3700; organism=Daucus carota; type=genetic_marker
AAGCATCCTTGTCCAAGCCACCAACAAAAATCTCAAAYTCTTTCCTTTTT
CGCCTCTCTTTGAAAACGTCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAGCATCCTTGTCCAAGCCACCAACAAAAATCTCAAA
Three Prime Flanking Region: 
TCTTTCCTTTTTCGCCTCTCTTTGAAAACGTCA
SNP: 
C/T