MK006275 K3719

Resource Type: 
Genetic Marker
Name: 
MK006275 K3719
Identifier: 
MK006275_K3719
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006275 K3719, is adjacent to primer, K3719_X.
The genetic_marker, MK006275 K3719, is adjacent to primer, K3719_Y.
The genetic_marker, MK006275 K3719, is adjacent to primer, K3719_Common.
The genetic_marker, MK006275 K3719, is located in gene, DCAR_018750.
The genetic_marker, MK006275 K3719, is located in gene, LOC108223530.
The marker_locus, K3719, is an instance of genetic_marker, MK006275 K3719.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr516.145K3719MapViewer
2016 Integ NG bin mapCH551.145K3719MapViewer
2016 Integ NG full mapCH551.498K3719MapViewer
2016 70796 NG bin mapChr516.145K3719MapViewer
Synonyms: 
  • MK006275
Sequence Coordinates: 
DCARv2_Chr5:32802252..32802302-
View location in JBrowse: 
DCARv2_Chr5:32802252..32802302-
Sequence: 
AGACATCGCACAAAGTGTTGGCTGTAGATGTGTATAAYGATAAGATCAAG
CACTTGCTCGAACCKGAYAGT
Sequences: 
>MK006275_K3719 ID=MK006275_K3719; Name=MK006275 K3719; organism=Daucus carota; type=genetic_marker
AGACATCGCACAAAGTGTTGGCTGTAGATGTGTATAAYGATAAGATCAAG
CACTTGCTCGAACCKGAYAGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGACATCGCACAAAGTGTTGGCTGTAGATGTGTATAA
Three Prime Flanking Region: 
GATAAGATCAAGCACTTGCTCGAACCKGAYAGT
SNP: 
C/T