MK006287 K3731

Resource Type: 
Genetic Marker
Name: 
MK006287 K3731
Identifier: 
MK006287_K3731
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006287 K3731, is adjacent to primer, K3731_X.
The genetic_marker, MK006287 K3731, is adjacent to primer, K3731_Y.
The genetic_marker, MK006287 K3731, is adjacent to primer, K3731_Common.
The genetic_marker, MK006287 K3731, is located in gene, DCAR_019515.
The genetic_marker, MK006287 K3731, is located in gene, LOC108223691.
The marker_locus, K3731, is an instance of genetic_marker, MK006287 K3731.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH562.732K3731MapViewer
2016 70796 NG full mapChr54.606K3731MapViewer
Synonyms: 
  • MK006287
Sequence Coordinates: 
DCARv2_Chr5:39681495..39681547+
View location in JBrowse: 
DCARv2_Chr5:39681495..39681547+
Sequence: 
AGCGAAATCCGGCTTCTTGGGCTGCAGAGGAAAATGGYGTCTGTCGATTT
TTATCCTGTGCCCTTTGGCGT
Sequences: 
>MK006287_K3731 ID=MK006287_K3731; Name=MK006287 K3731; organism=Daucus carota; type=genetic_marker
AGCGAAATCCGGCTTCTTGGGCTGCAGAGGAAAATGGYGTCTGTCGATTT
TTATCCTGTGCCCTTTGGCGT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGCGAAATCCGGCTTCTTGGGCTGCAGAGGAAAATGG
Three Prime Flanking Region: 
GTCTGTCGATTTTTATCCTGTGCCCTTTGGCGT
SNP: 
C/T