MK006340 K3784

Resource Type: 
Genetic Marker
Name: 
MK006340 K3784
Identifier: 
MK006340_K3784
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006340 K3784, is adjacent to primer, K3784_X.
The genetic_marker, MK006340 K3784, is adjacent to primer, K3784_Y.
The genetic_marker, MK006340 K3784, is adjacent to primer, K3784_Common.
The genetic_marker, MK006340 K3784, is located in gene, DCAR_030860.
The genetic_marker, MK006340 K3784, is located in gene, LOC108203053.
The marker_locus, K3784, is an instance of genetic_marker, MK006340 K3784.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH944.803K3784MapViewer
2016 70796 NG full mapChr949.791K3784MapViewer
2016 70796 NG bin mapChr949.791K3784MapViewer
Synonyms: 
  • MK006340
Sequence Coordinates: 
DCARv2_Chr9:30458902..30458946+
View location in JBrowse: 
DCARv2_Chr9:30458902..30458946+
Sequence: 
GGGCCCAATAGGTTATGCCAGGAACACAAGCAGCAATRTTGCTCCAACAT
CTTCTATGTATGCTGCTGCWG
Sequences: 
>MK006340_K3784 ID=MK006340_K3784; Name=MK006340 K3784; organism=Daucus carota; type=genetic_marker
GGGCCCAATAGGTTATGCCAGGAACACAAGCAGCAATRTTGCTCCAACAT
CTTCTATGTATGCTGCTGCWG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GGGCCCAATAGGTTATGCCAGGAACACAAGCAGCAAT
Three Prime Flanking Region: 
TTGCTCCAACATCTTCTATGTATGCTGCTGCWG
SNP: 
A/G