MK006348 K3792

Resource Type: 
Genetic Marker
Name: 
MK006348 K3792
Identifier: 
MK006348_K3792
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006348 K3792, is adjacent to primer, K3792_X.
The genetic_marker, MK006348 K3792, is adjacent to primer, K3792_Y.
The genetic_marker, MK006348 K3792, is adjacent to primer, K3792_Common.
The genetic_marker, MK006348 K3792, is adjacent to gene, DCAR_019686.
The genetic_marker, MK006348 K3792, is located in gene, LOC108220464.
The marker_locus, K3792, is an instance of genetic_marker, MK006348 K3792.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr52.557K3792MapViewer
2016 Integ NG full mapCH564.839K3792MapViewer
2016 70796 NG bin mapChr52.557K3792MapViewer
2016 Integ NG bin mapCH564.767K3792MapViewer
Synonyms: 
  • MK006348
Sequence Coordinates: 
DCARv2_Chr5:41026604..41026666-
View location in JBrowse: 
DCARv2_Chr5:41026604..41026666-
Sequence: 
TTAGTTAKTTCTTACTCATACACTGGTCATGTTTATAYTCTAAAAAAATC
AACAACAAAGGGAAGTAACAA
Sequences: 
>MK006348_K3792 ID=MK006348_K3792; Name=MK006348 K3792; organism=Daucus carota; type=genetic_marker
TTAGTTAKTTCTTACTCATACACTGGTCATGTTTATAYTCTAAAAAAATC
AACAACAAAGGGAAGTAACAA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TTAGTTAKTTCTTACTCATACACTGGTCATGTTTATA
Three Prime Flanking Region: 
TCTAAAAAAATCAACAACAAAGGGAAGTAACAA
SNP: 
C/T