MK006374 K3818

Resource Type: 
Genetic Marker
Name: 
MK006374 K3818
Identifier: 
MK006374_K3818
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK006374 K3818, is adjacent to primer, K3818_X.
The genetic_marker, MK006374 K3818, is adjacent to primer, K3818_Y.
The genetic_marker, MK006374 K3818, is adjacent to primer, K3818_Common.
The genetic_marker, MK006374 K3818, is located in gene, LOC108224954.
The marker_locus, K3818, is an instance of genetic_marker, MK006374 K3818.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH653.158K3818MapViewer
2016 70796 NG full mapChr651.147K3818MapViewer
2016 Integ NG full mapCH656.791K3818MapViewer
2016 70796 NG bin mapChr651.147K3818MapViewer
Synonyms: 
  • MK006374
Sequence Coordinates: 
DCARv2_Chr6:22495210..22495254-
View location in JBrowse: 
DCARv2_Chr6:22495210..22495254-
Sequence: 
AAATAAAAATCTGAGACCTCATGCTCTCCACAGCTCCYAATGACTCGGCA
ACTCAAAAAAGAAYGGTGTCA
Sequences: 
>MK006374_K3818 ID=MK006374_K3818; Name=MK006374 K3818; organism=Daucus carota; type=genetic_marker
AAATAAAAATCTGAGACCTCATGCTCTCCACAGCTCCYAATGACTCGGCA
ACTCAAAAAAGAAYGGTGTCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AAATAAAAATCTGAGACCTCATGCTCTCCACAGCTCC
Three Prime Flanking Region: 
AATGACTCGGCAACTCAAAAAAGAAYGGTGTCA
SNP: 
C/T