MK006386 K3830

Resource Type: 
Genetic Marker
Name: 
MK006386 K3830
Identifier: 
MK006386_K3830
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 5 relationships.
Relationships
The genetic_marker, MK006386 K3830, is adjacent to primer, K3830_X.
The genetic_marker, MK006386 K3830, is adjacent to primer, K3830_Y.
The genetic_marker, MK006386 K3830, is adjacent to primer, K3830_Common.
The genetic_marker, MK006386 K3830, is located in gene, LOC108225317.
The marker_locus, K3830, is an instance of genetic_marker, MK006386 K3830.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr652.997K3830MapViewer
2016 Integ NG full mapCH658.691K3830MapViewer
Synonyms: 
  • MK006386
Sequence Coordinates: 
DCARv2_Chr6:25915662..25915719-
View location in JBrowse: 
DCARv2_Chr6:25915662..25915719-
Sequence: 
GCGCGGRTACTAATTACTAAACCATGACAAGTTGAGGYTCATATCTGATG
CCATACTTCATCTTCCTTATG
Sequences: 
>MK006386_K3830 ID=MK006386_K3830; Name=MK006386 K3830; organism=Daucus carota; type=genetic_marker
GCGCGGRTACTAATTACTAAACCATGACAAGTTGAGGYTCATATCTGATG
CCATACTTCATCTTCCTTATG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCGCGGRTACTAATTACTAAACCATGACAAGTTGAGG
Three Prime Flanking Region: 
TCATATCTGATGCCATACTTCATCTTCCTTATG
SNP: 
C/T