MK006438 K3882

Resource Type: 
Genetic Marker
Name: 
MK006438 K3882
Identifier: 
MK006438_K3882
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006438 K3882, is adjacent to primer, K3882_X.
The genetic_marker, MK006438 K3882, is adjacent to primer, K3882_Y.
The genetic_marker, MK006438 K3882, is adjacent to primer, K3882_Common.
The genetic_marker, MK006438 K3882, is located in gene, DCAR_026804.
The genetic_marker, MK006438 K3882, is located in gene, LOC108199318.
The marker_locus, K3882, is an instance of genetic_marker, MK006438 K3882.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH857.283K3882MapViewer
2016 80592 NG full mapChr89.22K3882MapViewer
2016 70796 NG full mapChr88.866K3882MapViewer
Synonyms: 
  • MK006438
Sequence Coordinates: 
DCARv2_Chr8:28555153..28555213+
View location in JBrowse: 
DCARv2_Chr8:28555153..28555213+
Sequence: 
ACARCAATCCWGGTACAGTATCCTCCTTCTCTGGTGCWGCTGTGAAGTCA
TTAGGTTTTTCATCTGAATCT
Sequences: 
>MK006438_K3882 ID=MK006438_K3882; Name=MK006438 K3882; organism=Daucus carota; type=genetic_marker
ACARCAATCCWGGTACAGTATCCTCCTTCTCTGGTGCWGCTGTGAAGTCA
TTAGGTTTTTCATCTGAATCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
ACARCAATCCWGGTACAGTATCCTCCTTCTCTGGTGC
Three Prime Flanking Region: 
GCTGTGAAGTCATTAGGTTTTTCATCTGAATCT
SNP: 
A/T