MK006439 K3883

Resource Type: 
Genetic Marker
Name: 
MK006439 K3883
Identifier: 
MK006439_K3883
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006439 K3883, is adjacent to primer, K3883_X.
The genetic_marker, MK006439 K3883, is adjacent to primer, K3883_Y.
The genetic_marker, MK006439 K3883, is adjacent to primer, K3883_Common.
The genetic_marker, MK006439 K3883, is located in gene, DCAR_027745.
The genetic_marker, MK006439 K3883, is located in gene, LOC108199678.
The marker_locus, K3883, is an instance of genetic_marker, MK006439 K3883.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH848.222K3883MapViewer
2016 70796 NG full mapChr818.347K3883MapViewer
Synonyms: 
  • MK006439
Sequence Coordinates: 
DCARv2_Chr8:19876210..19876255+
View location in JBrowse: 
DCARv2_Chr8:19876210..19876255+
Sequence: 
GAATTCATGCCATGTTTGGAGCTTTTGTGATAGGAATYCTTGTTCCAAAG
GATGGGCCCCTTGCAGGTGCA
Sequences: 
>MK006439_K3883 ID=MK006439_K3883; Name=MK006439 K3883; organism=Daucus carota; type=genetic_marker
GAATTCATGCCATGTTTGGAGCTTTTGTGATAGGAATYCTTGTTCCAAAG
GATGGGCCCCTTGCAGGTGCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GAATTCATGCCATGTTTGGAGCTTTTGTGATAGGAAT
Three Prime Flanking Region: 
CTTGTTCCAAAGGATGGGCCCCTTGCAGGTGCA
SNP: 
C/T