MK006453 K3897

Resource Type: 
Genetic Marker
Name: 
MK006453 K3897
Identifier: 
MK006453_K3897
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006453 K3897, is adjacent to primer, K3897_X.
The genetic_marker, MK006453 K3897, is adjacent to primer, K3897_Y.
The genetic_marker, MK006453 K3897, is adjacent to primer, K3897_Common.
The genetic_marker, MK006453 K3897, is located in gene, DCAR_030045.
The genetic_marker, MK006453 K3897, is located in gene, LOC108200295.
The marker_locus, K3897, is an instance of genetic_marker, MK006453 K3897.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr932.829K3897MapViewer
2016 Integ NG bin mapCH931.565K3897MapViewer
2016 80592 NG full mapChr931.163K3897MapViewer
2016 70796 NG bin mapChr932.829K3897MapViewer
2016 Integ NG full mapCH930.555K3897MapViewer
Synonyms: 
  • MK006453
Sequence Coordinates: 
DCARv2_Chr9:19907173..19907226+
View location in JBrowse: 
DCARv2_Chr9:19907173..19907226+
Sequence: 
CCATTGTCAAGCTAAACACGCCTCCTTGATTTTCATCYGGATGTTCTTTA
GCTGCATACATGGCGGCCTCA
Sequences: 
>MK006453_K3897 ID=MK006453_K3897; Name=MK006453 K3897; organism=Daucus carota; type=genetic_marker
CCATTGTCAAGCTAAACACGCCTCCTTGATTTTCATCYGGATGTTCTTTA
GCTGCATACATGGCGGCCTCA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CCATTGTCAAGCTAAACACGCCTCCTTGATTTTCATC
Three Prime Flanking Region: 
GGATGTTCTTTAGCTGCATACATGGCGGCCTCA
SNP: 
C/T