MK006479 K3923

Resource Type: 
Genetic Marker
Name: 
MK006479 K3923
Identifier: 
MK006479_K3923
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006479 K3923, is adjacent to primer, K3923_X.
The genetic_marker, MK006479 K3923, is adjacent to primer, K3923_Y.
The genetic_marker, MK006479 K3923, is adjacent to primer, K3923_Common.
The genetic_marker, MK006479 K3923, is located in gene, DCAR_027686.
The genetic_marker, MK006479 K3923, is located in gene, LOC108198358.
The marker_locus, K3923, is an instance of genetic_marker, MK006479 K3923.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr818.347K3923MapViewer
2016 Integ NG full mapCH848.201K3923MapViewer
Synonyms: 
  • MK006479
Sequence Coordinates: 
DCARv2_Chr8:20593689..20593738+
View location in JBrowse: 
DCARv2_Chr8:20593689..20593738+
Sequence: 
CGCCSTCTCCWTCGCAACAAGCCCCCCCTCAAACCCTWGTTTTAACACTC
AATCGCAAGAAGAAGAAGGTT
Sequences: 
>MK006479_K3923 ID=MK006479_K3923; Name=MK006479 K3923; organism=Daucus carota; type=genetic_marker
CGCCSTCTCCWTCGCAACAAGCCCCCCCTCAAACCCTWGTTTTAACACTC
AATCGCAAGAAGAAGAAGGTT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
CGCCSTCTCCWTCGCAACAAGCCCCCCCTCAAACCCT
Three Prime Flanking Region: 
GTTTTAACACTCAATCGCAAGAAGAAGAAGGTT
SNP: 
A/T