MK006486 K3930

Resource Type: 
Genetic Marker
Name: 
MK006486 K3930
Identifier: 
MK006486_K3930
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006486 K3930, is adjacent to primer, K3930_X.
The genetic_marker, MK006486 K3930, is adjacent to primer, K3930_Y.
The genetic_marker, MK006486 K3930, is adjacent to primer, K3930_Common.
The genetic_marker, MK006486 K3930, is located in gene, DCAR_026692.
The genetic_marker, MK006486 K3930, is located in gene, LOC108199365.
The marker_locus, K3930, is an instance of genetic_marker, MK006486 K3930.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH854.205K3930MapViewer
2016 70796 NG full mapChr86.62K3930MapViewer
2016 Integ NG full mapCH859.837K3930MapViewer
2016 70796 NG bin mapChr86.62K3930MapViewer
Synonyms: 
  • MK006486
Sequence Coordinates: 
DCARv2_Chr8:29632627..29632684-
View location in JBrowse: 
DCARv2_Chr8:29632627..29632684-
Sequence: 
TCTTGGCACGGATCAAATTCATTCCCTGAGCATAACTRCATATTTTTGAT
GCATAAAGCGCTTGTCTAACA
Sequences: 
>MK006486_K3930 ID=MK006486_K3930; Name=MK006486 K3930; organism=Daucus carota; type=genetic_marker
TCTTGGCACGGATCAAATTCATTCCCTGAGCATAACTRCATATTTTTGAT
GCATAAAGCGCTTGTCTAACA
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCTTGGCACGGATCAAATTCATTCCCTGAGCATAACT
Three Prime Flanking Region: 
CATATTTTTGATGCATAAAGCGCTTGTCTAACA
SNP: 
A/G