MK006492 K3936

Resource Type: 
Genetic Marker
Name: 
MK006492 K3936
Identifier: 
MK006492_K3936
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006492 K3936, is adjacent to primer, K3936_X.
The genetic_marker, MK006492 K3936, is adjacent to primer, K3936_Y.
The genetic_marker, MK006492 K3936, is adjacent to primer, K3936_Common.
The genetic_marker, MK006492 K3936, is located in gene, DCAR_030950.
The genetic_marker, MK006492 K3936, is adjacent to gene, LOC108202839.
The marker_locus, K3936, is an instance of genetic_marker, MK006492 K3936.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr952.177K3936MapViewer
2016 Integ NG bin mapCH949.485K3936MapViewer
2016 Integ NG full mapCH947.231K3936MapViewer
2016 70796 NG bin mapChr952.177K3936MapViewer
Synonyms: 
  • MK006492
Sequence Coordinates: 
DCARv2_Chr9:31352237..31353568+
View location in JBrowse: 
DCARv2_Chr9:31352237..31353568+
Sequence: 
GCATCAATCCTATCAGTTATCTAGATCTTCCTGAAGCYGACTCTTCTGAT
GTTAAAGGTGGACTCCCAAAT
Sequences: 
>MK006492_K3936 ID=MK006492_K3936; Name=MK006492 K3936; organism=Daucus carota; type=genetic_marker
GCATCAATCCTATCAGTTATCTAGATCTTCCTGAAGCYGACTCTTCTGAT
GTTAAAGGTGGACTCCCAAAT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
GCATCAATCCTATCAGTTATCTAGATCTTCCTGAAGC
Three Prime Flanking Region: 
GACTCTTCTGATGTTAAAGGTGGACTCCCAAAT
SNP: 
C/T