MK006494 K3938

Resource Type: 
Genetic Marker
Name: 
MK006494 K3938
Identifier: 
MK006494_K3938
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006494 K3938, is adjacent to primer, K3938_X.
The genetic_marker, MK006494 K3938, is adjacent to primer, K3938_Y.
The genetic_marker, MK006494 K3938, is adjacent to primer, K3938_Common.
The genetic_marker, MK006494 K3938, is adjacent to gene, DCAR_027240.
The genetic_marker, MK006494 K3938, is located in gene, LOC108197177.
The marker_locus, K3938, is an instance of genetic_marker, MK006494 K3938.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG full mapCH852.037K3938MapViewer
2016 Integ NG bin mapCH846.373K3938MapViewer
2016 70796 NG bin mapChr814.494K3938MapViewer
2016 70796 NG full mapChr814.494K3938MapViewer
Synonyms: 
  • MK006494
Sequence Coordinates: 
DCARv2_Chr8:24897298..24897350+
View location in JBrowse: 
DCARv2_Chr8:24897298..24897350+
Sequence: 
TCTCTCCCAAAATGAACCCGGTTCAGTTCCGGCCACCWGAAACTCCAATG
GAGCTCATGGAGTTTCTATCT
Sequences: 
>MK006494_K3938 ID=MK006494_K3938; Name=MK006494 K3938; organism=Daucus carota; type=genetic_marker
TCTCTCCCAAAATGAACCCGGTTCAGTTCCGGCCACCWGAAACTCCAATG
GAGCTCATGGAGTTTCTATCT
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TCTCTCCCAAAATGAACCCGGTTCAGTTCCGGCCACC
Three Prime Flanking Region: 
GAAACTCCAATGGAGCTCATGGAGTTTCTATCT
SNP: 
A/T