MK006542 K3986

Resource Type: 
Genetic Marker
Name: 
MK006542 K3986
Identifier: 
MK006542_K3986
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006542 K3986, is adjacent to primer, K3986_X.
The genetic_marker, MK006542 K3986, is adjacent to primer, K3986_Y.
The genetic_marker, MK006542 K3986, is adjacent to primer, K3986_Common.
The genetic_marker, MK006542 K3986, is located in gene, DCAR_019622.
The genetic_marker, MK006542 K3986, is located in gene, LOC108219663.
The marker_locus, K3986, is an instance of genetic_marker, MK006542 K3986.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG full mapChr53.798K3986MapViewer
2016 Integ NG full mapCH563.58K3986MapViewer
Synonyms: 
  • MK006542
Sequence Coordinates: 
DCARv2_Chr5:40614633..40614691+
View location in JBrowse: 
DCARv2_Chr5:40614633..40614691+
Sequence: 
TGCATATTGCCAGATGCTAAATTGTCATCAAATAAGAYCCTTTCACGCAC
AGGTTTATCATCTGAGAGAWY
Sequences: 
>MK006542_K3986 ID=MK006542_K3986; Name=MK006542 K3986; organism=Daucus carota; type=genetic_marker
TGCATATTGCCAGATGCTAAATTGTCATCAAATAAGAYCCTTTCACGCAC
AGGTTTATCATCTGAGAGAWY
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGCATATTGCCAGATGCTAAATTGTCATCAAATAAGA
Three Prime Flanking Region: 
CCTTTCACGCACAGGTTTATCATCTGAGAGAWY
SNP: 
C/T