MK006545 K3989

Resource Type: 
Genetic Marker
Name: 
MK006545 K3989
Identifier: 
MK006545_K3989
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006545 K3989, is adjacent to primer, K3989_X.
The genetic_marker, MK006545 K3989, is adjacent to primer, K3989_Y.
The genetic_marker, MK006545 K3989, is adjacent to primer, K3989_Common.
The genetic_marker, MK006545 K3989, is located in gene, DCAR_017581.
The genetic_marker, MK006545 K3989, is located in gene, LOC108220839.
The marker_locus, K3989, is an instance of genetic_marker, MK006545 K3989.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 Integ NG bin mapCH541.049K3989MapViewer
2016 Integ NG full mapCH541.403K3989MapViewer
2016 70796 NG bin mapChr527.118K3989MapViewer
2016 70796 NG full mapChr527.118K3989MapViewer
Synonyms: 
  • MK006545
Sequence Coordinates: 
DCARv2_Chr5:21205456..21205507-
View location in JBrowse: 
DCARv2_Chr5:21205456..21205507-
Sequence: 
AGTATGGTAAGAATCTTGGTCTGTCCTTCCAAGTTGTRGATGACATACTG
GATTTTACTCAGTCTACTGAG
Sequences: 
>MK006545_K3989 ID=MK006545_K3989; Name=MK006545 K3989; organism=Daucus carota; type=genetic_marker
AGTATGGTAAGAATCTTGGTCTGTCCTTCCAAGTTGTRGATGACATACTG
GATTTTACTCAGTCTACTGAG
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
AGTATGGTAAGAATCTTGGTCTGTCCTTCCAAGTTGT
Three Prime Flanking Region: 
GATGACATACTGGATTTTACTCAGTCTACTGAG
SNP: 
A/G