MK006562 K4006

Resource Type: 
Genetic Marker
Name: 
MK006562 K4006
Identifier: 
MK006562_K4006
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006562 K4006, is adjacent to primer, K4006_X.
The genetic_marker, MK006562 K4006, is adjacent to primer, K4006_Y.
The genetic_marker, MK006562 K4006, is adjacent to primer, K4006_Common.
The genetic_marker, MK006562 K4006, is located in gene, DCAR_021859.
The genetic_marker, MK006562 K4006, is located in gene, LOC108224450.
The marker_locus, K4006, is an instance of genetic_marker, MK006562 K4006.
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MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 70796 NG bin mapChr649.29K4006MapViewer
2016 70796 NG full mapChr649.29K4006MapViewer
2016 Integ NG bin mapCH651.26K4006MapViewer
2016 Integ NG full mapCH654.914K4006MapViewer
Synonyms: 
  • MK006562
Sequence Coordinates: 
DCARv2_Chr6:19094849..19094895+
View location in JBrowse: 
Sequence: 
TAACTCGACACCACCACGTTACTCTCACTCTTCTTCTYCTCCTCCTTCAC
TTCCTTCTTCTCCTCCGTCAC
Sequences: 
>MK006562_K4006 ID=MK006562_K4006; Name=MK006562 K4006; organism=Daucus carota; type=genetic_marker
TAACTCGACACCACCACGTTACTCTCACTCTTCTTCTYCTCCTCCTTCAC
TTCCTTCTTCTCCTCCGTCAC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TAACTCGACACCACCACGTTACTCTCACTCTTCTTCT
Three Prime Flanking Region: 
CTCCTCCTTCACTTCCTTCTTCTCCTCCGTCAC
SNP: 
C/T