MK006617 K4061

Resource Type: 
Genetic Marker
Name: 
MK006617 K4061
Identifier: 
MK006617_K4061
Organism: 
Daucus carota subspecies sativus
Marker Type: 
SNP
Publication: 
Iorizzo M, Ellison S, Senalik D, Zeng P, Satapoomin P, Huang J, Bowman M, Iovene M, Sanseverino W, Cavagnaro P, Yildiz M, Macko-Podgórni A, Moranska E, Grzebelus E, Grzebelus D, Ashrafi H, Zheng Z, Cheng S, Spooner D, Van Deynze A, Simon P. A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.. Nature genetics. 2016 06; 48(6):657-66.
Relationship: 
There are 6 relationships.
Relationships
The genetic_marker, MK006617 K4061, is adjacent to primer, K4061_X.
The genetic_marker, MK006617 K4061, is adjacent to primer, K4061_Y.
The genetic_marker, MK006617 K4061, is adjacent to primer, K4061_Common.
The genetic_marker, MK006617 K4061, is located in gene, DCAR_022163.
The genetic_marker, MK006617 K4061, is located in gene, LOC108192906.
The marker_locus, K4061, is an instance of genetic_marker, MK006617 K4061.
MapViewer Marker Map Positions: 
Map NameLinkage GroupPositionLocusMapViewer
2016 80592 NG full mapChr611.347K4061MapViewer
2016 70796 NG full mapChr648.163K4061MapViewer
2016 Integ NG full mapCH654.09K4061MapViewer
2016 70796 NG bin mapChr648.163K4061MapViewer
2016 Integ NG bin mapCH650.118K4061MapViewer
Synonyms: 
  • MK006617
Sequence Coordinates: 
DCARv2_Chr6:16068779..16068834+
View location in JBrowse: 
DCARv2_Chr6:16068779..16068834+
Sequence: 
TGATCGCCCATGCGTTAACAAAGATCTTTGTTTTGGGKAGTACATTGTAG
CCACCAACTTTAAAGTGTGTC
Sequences: 
>MK006617_K4061 ID=MK006617_K4061; Name=MK006617 K4061; organism=Daucus carota; type=genetic_marker
TGATCGCCCATGCGTTAACAAAGATCTTTGTTTTGGGKAGTACATTGTAG
CCACCAACTTTAAAGTGTGTC
This is the primary representative sequence for this feature.
Sequence Length: 
71
Five Prime Flanking Region: 
TGATCGCCCATGCGTTAACAAAGATCTTTGTTTTGGG
Three Prime Flanking Region: 
AGTACATTGTAGCCACCAACTTTAAAGTGTGTC
SNP: 
G/T